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Pattern Search
user: GUEST
Pattern Input
Enter a pattern in PROSITE format
Prosite syntax
This form lets you search the protein databases with a pattern written according to the
Prosite syntax
.
Parameters
Database of sequences
ecoli
- Escherichia coli K12 proteome
sw
- Swiss-Prot
sw_var
- Swiss-Prot splice variants
tr
- TrEMBL
ens
- ENSEMBL peptides
ur50
- UniRef50
ur50_win20
- UniRef50 window shuffled (w=20)
Taxonomic restriction
(
NCBI taxonomic browser
)
- no restriction [all]-
Archaea [taxid:2157]
Bacteria (eubacteria) [taxid:2]
Eukaryota (eucaryotes) [taxid:2759]
Fungi [taxid:4751]
Metazoa [taxid:33208]
Arthropoda [taxid:6656]
Viridiplantae [taxid:33090]
Viruses [taxid:10239]
Homo_sapiens (human) [taxid:9606]
Mus_musculus (house mouse) [taxid:10090]
Xenopus laevis [taxid:8353]
Caenorhabditis elegans [taxid:6239]
Drosophila_melanogaster (fruit fly) [taxid:7227]
Arabidopsis_thaliana (thale cress) [taxid:3702]
Saccharomyces cerevisiae [taxid:4932]
Schizosaccharomyces pombe [taxid:4896]
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